from string import replace
from math import isnan
+from xml.etree import ElementTree as ET
from errors import PresentationError
from utils import mean, stdev, relative_change, remove_outliers, find_outliers
format(table.get("title", "")))
# Transform the data
- data = input_data.filter_data(table)
+ data = input_data.filter_data(table, continue_on_error=True)
# Prepare the header of the tables
try:
out_file.write(line)
+def table_performance_comparison_mrr(table, input_data):
+ """Generate the table(s) with algorithm: table_performance_comparison_mrr
+ specified in the specification file.
+
+ :param table: Table to generate.
+ :param input_data: Data to process.
+ :type table: pandas.Series
+ :type input_data: InputData
+ """
+
+ logging.info(" Generating the table {0} ...".
+ format(table.get("title", "")))
+
+ # Transform the data
+ data = input_data.filter_data(table, continue_on_error=True)
+
+ # Prepare the header of the tables
+ try:
+ header = ["Test case",
+ "{0} Throughput [Mpps]".format(table["reference"]["title"]),
+ "{0} stdev [Mpps]".format(table["reference"]["title"]),
+ "{0} Throughput [Mpps]".format(table["compare"]["title"]),
+ "{0} stdev [Mpps]".format(table["compare"]["title"]),
+ "Change [%]"]
+ header_str = ",".join(header) + "\n"
+ except (AttributeError, KeyError) as err:
+ logging.error("The model is invalid, missing parameter: {0}".
+ format(err))
+ return
+
+ # Prepare data to the table:
+ tbl_dict = dict()
+ for job, builds in table["reference"]["data"].items():
+ for build in builds:
+ for tst_name, tst_data in data[job][str(build)].iteritems():
+ if tbl_dict.get(tst_name, None) is None:
+ name = "{0}-{1}".format(tst_data["parent"].split("-")[0],
+ "-".join(tst_data["name"].
+ split("-")[1:]))
+ tbl_dict[tst_name] = {"name": name,
+ "ref-data": list(),
+ "cmp-data": list()}
+ try:
+ tbl_dict[tst_name]["ref-data"].\
+ append(tst_data["result"]["throughput"])
+ except TypeError:
+ pass # No data in output.xml for this test
+
+ for job, builds in table["compare"]["data"].items():
+ for build in builds:
+ for tst_name, tst_data in data[job][str(build)].iteritems():
+ try:
+ tbl_dict[tst_name]["cmp-data"].\
+ append(tst_data["result"]["throughput"])
+ except KeyError:
+ pass
+ except TypeError:
+ tbl_dict.pop(tst_name, None)
+
+ tbl_lst = list()
+ for tst_name in tbl_dict.keys():
+ item = [tbl_dict[tst_name]["name"], ]
+ if tbl_dict[tst_name]["ref-data"]:
+ data_t = remove_outliers(tbl_dict[tst_name]["ref-data"],
+ table["outlier-const"])
+ item.append(round(mean(data_t) / 1000000, 2))
+ item.append(round(stdev(data_t) / 1000000, 2))
+ else:
+ item.extend([None, None])
+ if tbl_dict[tst_name]["cmp-data"]:
+ data_t = remove_outliers(tbl_dict[tst_name]["cmp-data"],
+ table["outlier-const"])
+ item.append(round(mean(data_t) / 1000000, 2))
+ item.append(round(stdev(data_t) / 1000000, 2))
+ else:
+ item.extend([None, None])
+ if item[1] is not None and item[3] is not None and item[1] != 0:
+ item.append(int(relative_change(float(item[1]), float(item[3]))))
+ if len(item) == 6:
+ tbl_lst.append(item)
+
+ # Sort the table according to the relative change
+ tbl_lst.sort(key=lambda rel: rel[-1], reverse=True)
+
+ # Generate tables:
+ # All tests in csv:
+ tbl_names = ["{0}-1t1c-full{1}".format(table["output-file"],
+ table["output-file-ext"]),
+ "{0}-2t2c-full{1}".format(table["output-file"],
+ table["output-file-ext"]),
+ "{0}-4t4c-full{1}".format(table["output-file"],
+ table["output-file-ext"])
+ ]
+ for file_name in tbl_names:
+ logging.info(" Writing file: '{0}'".format(file_name))
+ with open(file_name, "w") as file_handler:
+ file_handler.write(header_str)
+ for test in tbl_lst:
+ if file_name.split("-")[-2] in test[0]: # cores
+ test[0] = "-".join(test[0].split("-")[:-1])
+ file_handler.write(",".join([str(item) for item in test]) +
+ "\n")
+
+ # All tests in txt:
+ tbl_names_txt = ["{0}-1t1c-full.txt".format(table["output-file"]),
+ "{0}-2t2c-full.txt".format(table["output-file"]),
+ "{0}-4t4c-full.txt".format(table["output-file"])
+ ]
+
+ for i, txt_name in enumerate(tbl_names_txt):
+ txt_table = None
+ logging.info(" Writing file: '{0}'".format(txt_name))
+ with open(tbl_names[i], 'rb') as csv_file:
+ csv_content = csv.reader(csv_file, delimiter=',', quotechar='"')
+ for row in csv_content:
+ if txt_table is None:
+ txt_table = prettytable.PrettyTable(row)
+ else:
+ txt_table.add_row(row)
+ txt_table.align["Test case"] = "l"
+ with open(txt_name, "w") as txt_file:
+ txt_file.write(str(txt_table))
+
+
def table_performance_trending_dashboard(table, input_data):
"""Generate the table(s) with algorithm: table_performance_comparison
specified in the specification file.
format(table.get("title", "")))
# Transform the data
- data = input_data.filter_data(table)
+ data = input_data.filter_data(table, continue_on_error=True)
# Prepare the header of the tables
- header = ["Test case",
- "Thput trend [Mpps]",
- "Change [Mpps]",
+ header = ["Test Case",
+ "Throughput Trend [Mpps]",
+ "Trend Compliance",
+ "Top Anomaly [Mpps]",
"Change [%]",
- "Anomaly"]
+ "Outliers [Number]"
+ ]
header_str = ",".join(header) + "\n"
# Prepare data to the table:
"-".join(tst_data["name"].
split("-")[1:]))
tbl_dict[tst_name] = {"name": name,
- "data": list()}
+ "data": dict()}
try:
- tbl_dict[tst_name]["data"]. \
- append(tst_data["result"]["throughput"])
+ tbl_dict[tst_name]["data"][str(build)] = \
+ tst_data["result"]["throughput"]
except (TypeError, KeyError):
pass # No data in output.xml for this test
tbl_lst = list()
for tst_name in tbl_dict.keys():
if len(tbl_dict[tst_name]["data"]) > 2:
+
pd_data = pd.Series(tbl_dict[tst_name]["data"])
win_size = pd_data.size \
if pd_data.size < table["window"] else table["window"]
# Test name:
name = tbl_dict[tst_name]["name"]
- # Throughput trend:
- trend = list(pd_data.rolling(window=win_size, min_periods=2).
- median())[-2]
- # Anomaly:
- t_data, _ = find_outliers(pd_data)
- last = list(t_data)[-1]
- t_stdev = list(t_data.rolling(window=win_size, min_periods=2).
- std())[-2]
- if isnan(last):
- anomaly = "outlier"
- last = list(pd_data)[-1]
- elif last < (trend - 3 * t_stdev):
- anomaly = "regression"
- elif last > (trend + 3 * t_stdev):
- anomaly = "progression"
- else:
- anomaly = "normal"
- if not isnan(last) and not isnan(trend) and trend != 0:
- # Change:
- change = round(float(last - trend) / 1000000, 2)
- # Relative change:
- rel_change = int(relative_change(float(trend), float(last)))
-
- tbl_lst.append([name,
- round(float(last) / 1000000, 2),
- change,
- rel_change,
- anomaly])
-
- # Sort the table according to the relative change
- tbl_lst.sort(key=lambda rel: rel[-2], reverse=True)
+ median = pd_data.rolling(window=win_size, min_periods=2).median()
+ trimmed_data, _ = find_outliers(pd_data, outlier_const=1.5)
+ stdev_t = pd_data.rolling(window=win_size, min_periods=2).std()
+
+ rel_change_lst = [None, ]
+ classification_lst = [None, ]
+ median_lst = [None, ]
+ sample_lst = [None, ]
+ first = True
+ for build_nr, value in pd_data.iteritems():
+ if first:
+ first = False
+ continue
+ # Relative changes list:
+ if not isnan(value) \
+ and not isnan(median[build_nr]) \
+ and median[build_nr] != 0:
+ rel_change_lst.append(round(
+ relative_change(float(median[build_nr]), float(value)),
+ 2))
+ else:
+ rel_change_lst.append(None)
+
+ # Classification list:
+ if isnan(trimmed_data[build_nr]) \
+ or isnan(median[build_nr]) \
+ or isnan(stdev_t[build_nr]) \
+ or isnan(value):
+ classification_lst.append("outlier")
+ elif value < (median[build_nr] - 3 * stdev_t[build_nr]):
+ classification_lst.append("regression")
+ elif value > (median[build_nr] + 3 * stdev_t[build_nr]):
+ classification_lst.append("progression")
+ else:
+ classification_lst.append("normal")
+ sample_lst.append(value)
+ median_lst.append(median[build_nr])
+
+ last_idx = len(classification_lst) - 1
+ first_idx = last_idx - int(table["evaluated-window"])
+ if first_idx < 0:
+ first_idx = 0
+
+ nr_outliers = 0
+ consecutive_outliers = 0
+ failure = False
+ for item in classification_lst[first_idx:]:
+ if item == "outlier":
+ nr_outliers += 1
+ consecutive_outliers += 1
+ if consecutive_outliers == 3:
+ failure = True
+ else:
+ consecutive_outliers = 0
+
+ if failure:
+ classification = "failure"
+ elif "regression" in classification_lst[first_idx:]:
+ classification = "regression"
+ elif "progression" in classification_lst[first_idx:]:
+ classification = "progression"
+ else:
+ classification = "normal"
- file_name = "{0}.{1}".format(table["output-file"], table["output-file-ext"])
+ if classification == "normal":
+ index = len(classification_lst) - 1
+ else:
+ tmp_classification = "outlier" if classification == "failure" \
+ else classification
+ for idx in range(first_idx, len(classification_lst)):
+ if classification_lst[idx] == tmp_classification:
+ index = idx
+ break
+ for idx in range(index+1, len(classification_lst)):
+ if classification_lst[idx] == tmp_classification:
+ if relative_change[idx] > relative_change[index]:
+ index = idx
+
+ # if "regression" in classification_lst[first_idx:]:
+ # classification = "regression"
+ # elif "outlier" in classification_lst[first_idx:]:
+ # classification = "outlier"
+ # elif "progression" in classification_lst[first_idx:]:
+ # classification = "progression"
+ # elif "normal" in classification_lst[first_idx:]:
+ # classification = "normal"
+ # else:
+ # classification = None
+ #
+ # nr_outliers = 0
+ # consecutive_outliers = 0
+ # failure = False
+ # for item in classification_lst[first_idx:]:
+ # if item == "outlier":
+ # nr_outliers += 1
+ # consecutive_outliers += 1
+ # if consecutive_outliers == 3:
+ # failure = True
+ # else:
+ # consecutive_outliers = 0
+ #
+ # idx = len(classification_lst) - 1
+ # while idx:
+ # if classification_lst[idx] == classification:
+ # break
+ # idx -= 1
+ #
+ # if failure:
+ # classification = "failure"
+ # elif classification == "outlier":
+ # classification = "normal"
+
+ trend = round(float(median_lst[-1]) / 1000000, 2) \
+ if not isnan(median_lst[-1]) else ''
+ sample = round(float(sample_lst[index]) / 1000000, 2) \
+ if not isnan(sample_lst[index]) else ''
+ rel_change = rel_change_lst[index] \
+ if rel_change_lst[index] is not None else ''
+ tbl_lst.append([name,
+ trend,
+ classification,
+ '-' if classification == "normal" else sample,
+ '-' if classification == "normal" else rel_change,
+ nr_outliers])
+
+ # Sort the table according to the classification
+ tbl_sorted = list()
+ for classification in ("failure", "regression", "progression", "normal"):
+ tbl_tmp = [item for item in tbl_lst if item[2] == classification]
+ tbl_tmp.sort(key=lambda rel: rel[0])
+ tbl_sorted.extend(tbl_tmp)
+
+ file_name = "{0}{1}".format(table["output-file"], table["output-file-ext"])
logging.info(" Writing file: '{0}'".format(file_name))
with open(file_name, "w") as file_handler:
file_handler.write(header_str)
- for test in tbl_lst:
+ for test in tbl_sorted:
file_handler.write(",".join([str(item) for item in test]) + '\n')
txt_file_name = "{0}.txt".format(table["output-file"])
txt_table.align["Test case"] = "l"
with open(txt_file_name, "w") as txt_file:
txt_file.write(str(txt_table))
+
+
+def table_performance_trending_dashboard_html(table, input_data):
+ """Generate the table(s) with algorithm:
+ table_performance_trending_dashboard_html specified in the specification
+ file.
+
+ :param table: Table to generate.
+ :param input_data: Data to process.
+ :type table: pandas.Series
+ :type input_data: InputData
+ """
+
+ logging.info(" Generating the table {0} ...".
+ format(table.get("title", "")))
+
+ try:
+ with open(table["input-file"], 'rb') as csv_file:
+ csv_content = csv.reader(csv_file, delimiter=',', quotechar='"')
+ csv_lst = [item for item in csv_content]
+ except KeyError:
+ logging.warning("The input file is not defined.")
+ return
+ except csv.Error as err:
+ logging.warning("Not possible to process the file '{0}'.\n{1}".
+ format(table["input-file"], err))
+ return
+
+ # Table:
+ dashboard = ET.Element("table", attrib=dict(width="100%", border='0'))
+
+ # Table header:
+ tr = ET.SubElement(dashboard, "tr", attrib=dict(bgcolor="#6699ff"))
+ for idx, item in enumerate(csv_lst[0]):
+ alignment = "left" if idx == 0 else "center"
+ th = ET.SubElement(tr, "th", attrib=dict(align=alignment))
+ th.text = item
+
+ # Rows:
+ for r_idx, row in enumerate(csv_lst[1:]):
+ background = "#D4E4F7" if r_idx % 2 else "white"
+ tr = ET.SubElement(dashboard, "tr", attrib=dict(bgcolor=background))
+
+ # Columns:
+ for c_idx, item in enumerate(row):
+ alignment = "left" if c_idx == 0 else "center"
+ td = ET.SubElement(tr, "td", attrib=dict(align=alignment))
+ if c_idx == 2:
+ if item == "regression":
+ td.set("bgcolor", "#eca1a6")
+ elif item == "failure":
+ td.set("bgcolor", "#d6cbd3")
+ elif item == "progression":
+ td.set("bgcolor", "#bdcebe")
+ td.text = item
+
+ try:
+ with open(table["output-file"], 'w') as html_file:
+ logging.info(" Writing file: '{0}'".
+ format(table["output-file"]))
+ html_file.write(".. raw:: html\n\n\t")
+ html_file.write(ET.tostring(dashboard))
+ html_file.write("\n\t<p><br><br></p>\n")
+ except KeyError:
+ logging.warning("The output file is not defined.")
+ return
Code Review / csit.git / blobdiff